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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914710.1_cds_XP_016464667.1_57687
CDS Infomation

[gene=LOC107787591] [db_xref=GeneID:107787591] [protein=ubiquitin-like modifier-activating enzyme atg7] [protein_id=XP_016464667.1] [location=join(3470..3605,4205..4422,4675..4866,4948..5002,5106..5200,5365..5554,5652..5757,5832..5976,6067..6225,6326..6514,6641..6841,6926..7041,7128..7287,7476..7655)] [gbkey=CDS]
Sequence

ATGGCGGATAGCGGAAGAGGAACAATTCTTCAATTTGCACCGTTTCAGAGTTCAGTAGAT
GAAGGATTCTGGCATAAATTATCTTCTTTAAAGCTCAATAAGTTGCGCCTTGATGATTCC
CCTATTCCTATTACTGGTTTTTATGCACCTTGCTCGCATCCTCAAGTATCAAATCACTTG
ACTCTTCTTGCTGAATCTTTGCCTGCTGAGTCCAATGAGGAATCATCGTCTCTTCCAGCT
AGTCAGGGGAACAGAAATAGGTGTCCTGTCCCTGGCATTCTTCTCAACACAAACACGCTA
GAAAGCTTTCACGCACTTGATAAGCAGAGCCTACTTAAGGCAGAATCCAAGAAGATATGG
GATGAGATTTGCTCGGGCAAAGTTGAGGAGGACAGTTCTGTGCTCTTAAGGTTCCTAGTT
ATATCATTTGCAGACTTGAAAAAATGGAGCTTTCATTATTGGTTTGCGTTCCCTGCTTTG
GTGCTTGATCCTCCTGCAACTCTGGTTAATTTAAAGCCAGCTTCCCAATGCTTCACTTCT
GAAGAGGCCGAATCTCTCTCTAGAGCTTGTAATGAGTGGCGTAGCTTGAGCTCTACTGCA
GATATACCATTCTTTCTGGTGTCTTTTGGTTCGGATTCAATTGTTACTCTCAGGCATCTA
AGGGAGTGGGAAGCCTGCCAAAATAATGTTCAAAAGGTTATTTTTGGTTTTTATGACCCT
TGTCATCTTCCAAGTAATCCTGGATGGCCACTTCGCAATTATCTTGCCTATATCTATTCA
AGGTGGGGCCTCGGAAAGATTCACTTCTTCTGCTACCGTGAGAACCGTGGTTTTGCAGAT
CTGGGCTTGTCGCTTGTTGGAGAAGCTGAAATATCTCTTTCACCAGGATGGAGGAATCAT
CAGAACATGCCTAACACTGTGGGATGGGAACTAAATAGAAGGAAGAAGGTTTCGAGGTGC
ATCAGCCTTGCTAAAACGATGGATCCAACAAGGTTGGCTGTATCAGCTGCTGATTTGAAC
TTGAAACTAATGAGATGGCGCACATTGCCTTCGTTGAATCTCGACATGTTGGCGGCTACA
AAATGTCTCCTCCTAGGAGCAGGTACACTAGGATGCCAGGTTGCTCGAATGCTTATGGCA
TGGGGTGTCCGAAAAATTACATTGCTTGACAGTGGGAAGGTCTCGATGTCTAATCCACTA
AGGCAGTCTCTTTATGTGCTTGATGACTGTCTAAATGGTGGCAAATTTAAGGCCGTTGCA
GCAGTTGAAAGTCTCAAGCGAATTTTTCCAGCAGTGGAAGCAGAAGGTGTTGTGATGGCT
ATTCCAATGCCTGGACATCCAGTGCCTAGCCAAGAAGAAAGTAATATACTAAATGACTGC
AGACGTTTGTGGGATTTGATTAACTCACATGACGCAATCTTTCTATTAACTGATACACGG
GAAAGTCGGTGGCTTCCTAGTCTACTTGGTGCAAGTGCTAACAAGATCACTATTAATGCA
GCCTTAGGCTTTGATAGCTTTCTAGTTATGCGTCATGGAGCAGGTCCTATGGGTTCTATA
CGAAACTCACAAGCTGAAACATCGAATAATATCTCTGCTAGTATGGAAAATCTTTCCATC
TCAAGTCAAAATGGATCACAGAGATTGGGGTGTTACTTCTGTAATGATGTGGTTGCACCA
ATTGATTCAACTGCCAATCGTACCCTGGACCAACAATGTACAGTTACTCGTCCGGGGCTT
GCTCCTATTGCATCAGCCCTGGCTGTTGAACTTTTGGTTGGAGTTTTGCATCATCCTTCT
GGAATATATGCCAAAGCTGAGTTTGCAAACTCTAATGATAACGGTAGCAATGAACAACCT
CTTGGCATTCTACCTCATCAGATTCGCGGTTCCCTCTCTCAGTTTTCTCAAATGACGCTC
GTTGGTCACGCTTCAACTTGTTGCACTGCTTGTTGCTCCACAGTGGTATCAGAATATCAG
ACGAGAGGAATGGACTTCGTGCTTCAAGCAATTAATCATCCTACATATCTGGAGGATCTA
ACTGGACTAACAGAATTGATGAAGTCAGCGGGATCTTACACGCTGGACTGGGATAATGAT
AGTGAAAATGATGACGACGACGATGATTGTGTAGAAATATAA

Peptide Sequence

PEP ID

XP_016464667.1
PEP Infomation

PREDICTED: ubiquitin-like modifier-activating enzyme atg7 [Nicotiana tabacum]
Sequence

MADSGRGTILQFAPFQSSVDEGFWHKLSSLKLNKLRLDDSPIPITGFYAPCSHPQVSNHL
TLLAESLPAESNEESSSLPASQGNRNRCPVPGILLNTNTLESFHALDKQSLLKAESKKIW
DEICSGKVEEDSSVLLRFLVISFADLKKWSFHYWFAFPALVLDPPATLVNLKPASQCFTS
EEAESLSRACNEWRSLSSTADIPFFLVSFGSDSIVTLRHLREWEACQNNVQKVIFGFYDP
CHLPSNPGWPLRNYLAYIYSRWGLGKIHFFCYRENRGFADLGLSLVGEAEISLSPGWRNH
QNMPNTVGWELNRRKKVSRCISLAKTMDPTRLAVSAADLNLKLMRWRTLPSLNLDMLAAT
KCLLLGAGTLGCQVARMLMAWGVRKITLLDSGKVSMSNPLRQSLYVLDDCLNGGKFKAVA
AVESLKRIFPAVEAEGVVMAIPMPGHPVPSQEESNILNDCRRLWDLINSHDAIFLLTDTR
ESRWLPSLLGASANKITINAALGFDSFLVMRHGAGPMGSIRNSQAETSNNISASMENLSI
SSQNGSQRLGCYFCNDVVAPIDSTANRTLDQQCTVTRPGLAPIASALAVELLVGVLHHPS
GIYAKAEFANSNDNGSNEQPLGILPHQIRGSLSQFSQMTLVGHASTCCTACCSTVVSEYQ
TRGMDFVLQAINHPTYLEDLTGLTELMKSAGSYTLDWDNDSENDDDDDDCVEI

Transcript Sequence

Gene sequence data has not been registered.